Yes, we've heard you and we are currently working hard on Jom Comment 4.0 . There will be drastic changes since Jom Comment 3.0.1 and one that you should take note of is that it will no longer support Joomla 1.0 since it is already deprecated. Other than that, threaded comments will be made possible and of course, pagination.

Trackbacks and comments are now treated as a 'response' towards an article instead of separating them. There is no release date scheduled yet currently. Window popups are enhanced and will look much more interactive than the existing popups. Caching from Jom Comment will now be removed and it will solely rely on Joomla's caching mechanism. Language files will also be changed in accordance to Joomla's language format so that multi lingual will work correctly without applying any hacks.

JomSocial integration will be enhanced and will include user points when a user interacts with the system.

Let us know what you think with the new changes being added in Jom Comment 4.0 =) More to come soon.....